Abstract: Millions of individuals living in disadvantaged communities are burdened by poverty, illegal drug activities, health concerns, and the lack of reliable and affordable access to facilities (e.g., schools, hospitals, and transit stations). To address these societal problems efficiently with broad support, initiatives have called to engage agents (e.g., residents, community leaders, or stakeholders) and consider their preferences on community improvement decisions to make collective community decisions. In this talk, we will focus on our ongoing AI-empowered collective decision-making approaches to improve the accessibility of individuals to facilities by (a) locating facilities to provide essential services and (b) strengthening existing infrastructures via structural modifications (e.g., constructing new roads, bridges, multi-use paths, or shuttle services) subject to individuals' preferences on the locations of the facilities and which communities to improve access, respectively. In particular, we will discuss our (theoretical and algorithmic) studies on modeling these approaches under several settings (e.g., accounting for fairness and agent preferences) and designing fair, transparent, strategy proof, and (approximately) optimal mechanisms to elicit (true) individual preferences and determine collective community decisions in order to improve facility accessibility. Finally, we will discuss other ongoing and future collective decision-making efforts in urban planning and public health (i.e., our recent studies on substance use research) to improve communities.

Bio: Hau Chan is an assistant professor in the School of Computing at the University of Nebraska-Lincoln. He received his Ph.D. in Computer Science from Stony Brook University in 2015 and completed three years of Postdoctoral Fellowships, including at the Laboratory for Innovation Science at Harvard University in 2018. His main research lies in multi-agent aspects of AI for Society and Social Good, focusing on developing modeling and algorithmic foundations for tackling societal problems involving agents and predicting agent behavior in societal contexts, leveraging AI, game theory, mechanism design, and machine learning to better inform policymaking and (collective) decision-making. His team has been addressing societal challenges and fairness issues in various domains, including security (e.g., reducing vulnerability), public health (e.g., reducing substance use and homelessness), and urban planning (e.g., improving accessibility to public facilities), collaborating with domain experts. His research has been supported by NSF, NIH, and USCYBERCOM. He has received several Best Paper Awards at SDM and AAMAS and distinguished/outstanding SPC/PC member recognitions at IJCAI and WSDM. He has given tutorials and talks on computational game theory and mechanism design at venues such as AAMAS and IJCAI, including an Early Career Spotlight at IJCAI 2022. He has served as co-chairs for the AI and Social Good Track, Demonstration Track, Student Activities, Doctoral Consortium, Job Fair, Scholarships, Finance, and Diversity & Inclusion Activities at AAAI, AAMAS, and IJCAI.

Location: Old Computer Science, room 1310

The Hudson River Estuary (HRE) and New York Bight (NYB) are closely connected, with HRE acting as crucial areas where many NYB marine species spawn and grow. Understanding how these biotic and abiotic environments interact, especially with rapid climate change, is key to better managing fisheries and conserving ecosystems. To better understand the HRE-NYB ecosystem, we develop a comprehensive ecosystem model that links physical and biological processes. Using data from long-term monitoring programs, we analyze ecological patterns and identify key factors regulating the ecosystem. We use this information to develop a model that mimics the food web from tiny plankton to large predators in the ecosystem. This model can help us better understand how changes in the environment, like rising temperatures, and human activities such as fishing affect marine lives and ecosystem over time. The insights from this model can support smarter fisheries management and efforts to conserve marine ecosystems in the HRE-NYB region.

IACS Student Seminar Speaker: Xiangyan Yang, Dept. of Applied Math & Statistics

Location: IACS Seminar Room or Zoom

Join Zoom Meeting: https://stonybrook.zoom.us/j/91650247483?pwd=fvAGEwadplJh7jFC5RWcdvZ5NWPJth.1
Meeting ID: 916 5024 7483
Passcode: 631055
Qualitative data can be challenging to analyze and interpret effectively. In this workshop, SBU Libraries' Data Literacies Lead, Ahmad Pratama will show you how to extract meaningful insights from textual data, including understanding sentiment trends. Learn to explore qualitative data with Python using word clouds, basic natural language processing (NLP) techniques, and lexicon-based sentiment analysis with VADER.
RSVP via link: https://t.e2ma.net/click/t70ivh/5wwlu4oe/hy5q96
Presented by Stony Brook University Department of Biomedical Informatics and Long Island Network for Clinical and Translational Science (LINCATS).

The seminar aims to empower participants with the knowledge and skills necessary to harness AI effectively in clinical practice and research. It will equip attendees with practical insights, case studies, and interactive discussions led by experts in both AI and medicine, fostering a collaborative environment where attendee can explore how to overcome barriers and maximize the potential of AI in transforming modern healthcare delivery.

All Stony Brook Audiences Welcome.
Please note: This exciting event is open to all Stony Brook Faculty/Staff/Students. While the overarching theme for this event is the application of AI in medicine, the event is designed to bridge the professional practice gap that exists between cutting-edge AI research and its practical implementation in clinical settings, While AI holds immense promise for transforming healthcare delivery, many physicians and researchers lack the foundational knowledge and practical skills needed to effectively integrate AI into their daily practices.

THIS CONFERENCE IS FOR STONY BROOK UNIVERSITY & HOSPITAL FACULTY/STAFF & STUDENTS ONLY.


Registration link: https://cme.stonybrookmedicine.edu/continuing-medical-education/conferences/235/bench-to-bedside-understanding-the-practical-application-of-ai-in-medicine-2024/10/17/2024

FOR QUESTIONS
joseph.cesaria@stonybrookmedicine.edu
mary.saltz@stonybookmedicine.edu
Predictable Autonomy for Cyber-Physical Systems by Stanley Bak, Safe Sky Analytics

ABSTRACT: Cyber-physical systems combine complex physics with complex software. Although these systems offer significant potential in fields such as smart grid design, autonomous robotics and medical systems, verification of CPS designs remains challenging. Model-based design permits simulations to be used to explore potential system behaviors, but individual simulations do not provide full coverage of what the system can do. In particular, simulations cannot guarantee the absence of unsafe behaviors, which is unsettling as many CPS are safety-critical systems.

The goal of set-based analysis methods is to explore a system's behaviors using sets of states, rather than individual states. The usual downside of this approach is that set-based analysis methods are limited in scalability, working only for very small models. This talk describes our recent process on improving the scalability of set-based reachability computation for LTI hybrid automaton models, some of which can apply to very large systems (up to one billion continuous state variables!). Lastly, we'll discuss the significant overlap of techniques used for our scalable reachability analysis methods with set-based input/output analysis of neural networks.

BIO: Stanley Bak is a computer scientist investigating the predictable design of autonomous cyber-physical systems. He strives to develop practical formal methods that are both scalable and useful, which demands developing new theory, programming efficient tools and building experimental systems. He received a Bachelor's degree in Computer Science from Rensselaer Polytechnic Institute (RPI) in 2007 (summa cum laude), and a Master's degree in Computer Science from the University of Illinois at Urbana-Champaign (UIUC) in 2009. He completed his PhD from the Department of Computer Science at UIUC in 2013. He received the Founders Award of Excellence for his undergraduate research at RPI in 2004, the Debra and Ira Cohen Graduate Fellowship from UIUC twice, in 2008 and 2009, and was awarded the Science, Mathematics and Research for Transformation (SMART) Scholarship from 2009 to 2013. From 2013 to 2018, Stanley was a Research Computer Scientist at the US Air Force Research Lab (AFRL), both in the Information Directorate in Rome, NY, and in the Aerospace Systems Directorate in Dayton, OH. He currently helps run Safe Sky Analytics, a research consulting company investigating verification and autonomous systems, and performs teaching as an Adjunct Professor at Georgetown University.
Spring 2025, Mondays 3.30 to 4.50 pm, NCS 220.

The seminar will be jointly taught by Prof. Chao Chen, chao.chen.1@stonybrook.edu and Prof. Dimitris Samaras samaras@cs.stonybrook.edu

The overall purpose of this seminar is to bring together people with interests
in Computer Vision theory and techniques and to examine current research issues. This course will be appropriate for people who already took a Computer Vision graduate course or already had research experience in Computer Vision.

To enroll in this course, you must either: (1) be in the Ph.D. program or (2) receive permission from the instructors.

Each seminar will consist of multiple short talks (around 15 minutes) by multiple students. Students can register for 1 credit for CSE656. Registered students must attend and present a minimum of 2 talks. Registered students must attend in person. Up to 3 absences will be excused. Everyone else is welcome to attend.

Join here. Meeting ID: 927 2069 8658. Passcode: 130934.
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Le Hou Dissertation Defense: Deep Learning for Digital Histopathology across Multiple Scales

ABSTRACT: Histopathology is the study of tissue changes caused by diseases such as cancer. It plays a crucial role in disease diagnosis, survival analysis and development of new treatments. Using computer vision techniques, I focus on multiple tasks for automated analysis in digital histopathology images, which are challenging because histopathology images are heterogeneous and complex, due to the large variation of hundreds of cancer types in gigapixel resolution. In this thesis, I show how histopathology image analysis tasks can be viewed in three scales: Whole Slide Image (WSI)-level, patch-level and cellular-level, and present my contributions in each resolution level.

BIO: WSI-level analysis such as classifying WSIs into cancer types is challenging, because conventional classification methods such as off-the-shelf deep learning models cannot be applied directly on gigapixel WSIs due to computational limitations. I contribute a patch-based deep learning method that classifies gigapixel WSIs into cancer types and subtypes with close-to-human performance. This method is useful for computer-aided diagnosis. At patch-level, I contribute a novel method for histopathology image patch classification. On the task of identifying Tumor Infiltrating Lymphocyte (TIL) regions, the prediction result of this method correlates to the survival rate of patients. At cellular-level, I contribute novel methods for nucleus classification and roundness regression, which are interpretable features for histopathology studies. With this method, I generated a large-scale dataset of segmented nuclei, in WSIs from a large publicly available digital histopathology image dataset, to help advance histopathology research.