We invite faculty to deliver a 10-minute presentation during our afternoon session at the CELT Symposium on April 11, 2025. Showcase how you use emerging technology (i.e. AI, VR, etc.) to support diverse student populations and enhance learning experiences. Share your innovative strategies and inspire others!

CELT Symposium Theme: A New Era of Inclusivity and Innovation in Higher Education

https://t.e2ma.net/click/5w0gph/5wwlu4oe/9v63j6
Abstract: Astronomers slowly made sense of the cosmos by following the stars night after night. I suggest we examine human identity in a similar way. Let's observe the words individuals use to describe themselves day after day. In this presentation, I will introduce ipseology - a new approach to studying human selves. Ipseology is the systematic, empirical study of ipseity: selfhood, individuality and the elements of identity. The primary idea is that we can learn a lot about people from their self-authored self-descriptions - especially if we follow their revisions over time. I will discuss results from sampling millions of social media bios over more than a decade and present new approaches for observation in the Post-API age.

Bio: Dr. Jason Jeffrey Jones is a computational social scientist whose expertise includes online experiments, social networks, high-throughput text analysis and machine learning. He is interested in humans' perceptions of themselves and the developing role of artificial intelligence in society.

Dr. Jones is the director of CSSERG (pronounced sea surge): the Computational Social Science of Emerging Realities Group. CSSERG is a team of scholars committed to cross-disciplinary collaboration, united by common computational methodologies and always with eyes on the near future. CSSERG has studied the effectiveness of virtual reality in evoking empathy, the dynamics of gender stereotypes in language over decades and temporal trends in personally expressed identity.

This seminar will take place in person and online (zoom link below):

Join Zoom Meeting
https://stonybrook.zoom.us/j/93686609778?pwd=KdHVyIbU3ymML6hTchXsm6JLYKLSru.1

Meeting ID: 936 8660 9778
Passcode: 638699
Join Zoom Meeting
https://stonybrook.zoom.us/j/98079526509?pwd=Wkt5eURhVDN5VE56TUloS2h5V1Jodz09

Meeting ID: 980 7952 6509
Passcode: 949941



Abstract Over the last decade, artificial neural networks have undergone a revolution, catalyzed by better
supervised learning algorithms. However, in stark contrast to young animals (including humans), training such
networks requires enormous numbers of labeled examples, leading to the belief that animals must rely instead
mainly on unsupervised learning. The reason is that most animal behavior is not the result of clever learning
algorithms--supervised or unsupervised-- but is encoded in the genome. Specifically, animals are born with
highly structured brain connectivity, which enables them to learn very rapidly. Because the wiring diagram is
far too complex to be specified explicitly in the genome, it must be compressed through a genomic
bottleneck. I will describe results showing how the genomic bottleneck algorithm can lead to dramatic
compression of networks and better generalization, particularly for rapid transfer in supervised and
reinforcement learning.

Anthony Zador is professor of neuroscience at CSHL.
Title: Class visual similarity based noisy sample removal in generative Few Shot Learning
Time: Thursday, Feb 4, 11:30am - 1:00pm
Zoom:
https://stonybrook.zoom.us/j/8563646526?pwd=anJna1gzUStXNlNVSUIzdDRUSC9CUT09

Meeting ID: 856 364 6526
Passcode: 203791



Abstract:  

Over the past decade, larger datasets, hardware accelerations, and network architecture improvements have contributed to phenomenal achievements in many tasks of computer

vision. However, in the absence of large datasets, computer vision models struggle to learn

general representations which results in poor performance. Few-shot learning tries to address 

this problem by proposing models which learn from a few examples.


I first give an overall review of few-shot learning methods. I particularly focus on generative Few Shot Learning(FSL) methods, which augment the scarce categories in a dataset by generating samples for those rare categories. As the actual class distribution can be complex and lie very close to each other, the sample generated for one class can be noisy or lie close to another class.  However, none of the current FS generative methods perform any form of quality control of the generated samples.


In this work, I propose to identify and remove the generated samples that are less likely to be in the distribution of the few-shot class. Here I particularly deal with few-shot scenarios where the

prior information of the relationship between the classes based on visual  similarity is available. The main idea is to exploit these priors to better identify the unreliable generated samples.


Particularly, I have proposed two methods based on class relationship to detect noisy generated samples. In the first method, we assume that the embedding space of each class follows a Gaussian distribution.  From this assumption, I propose Gaussian Neighborhood (GN), a method to estimate how likely a generated sample is drawn from the estimated distribution of a few-shot class.  We evaluate this method on the Hematopoiesis dataset.  By simply eliminating samples based on thresholding our proposed GN scores, the few-shot  classification  performance  is  improved by 5% and 2% in five shot and one shot respectively, compared to the model trained on all generated images. 


The GN scores represent the similarity distances from the generated samples to their classes, based on the assumption that each class is a Gaussian distribution.  However, this assumption might be strict in many scenarios since the real distributions of data can be arbitrarily complex.  Thus in my second proposed method, I aim to learn such similarity distances directly from data via metric learning. I propose to train a deep-network to regress the similarity distance between a pair of samples.  This network is trained using both the class-level  visual  similarity  information  and  the  class  labels.   This method improves the 1-shot and 5-shot classification performances by 0.5% and 1% respectively, compared to GN.



New York Scientific Data Summit (NYSDS) is a premier annual conference that brings together researchers and thought leaders from academia, national labs and industry to exchange ideas and foster collaboration focused on data-driven science and technology. Co-hosted by Brookhaven National Laboratory and the Institute for Advanced Computational Science (IACS) at Stony Brook University, NYSDS 2025 will take place on September 11-12, 2025, in the SUNY Global Center in New York City.

NYSDS 2025 will spotlight artificial intelligence (AI), machine learning (ML) and robotics - fields currently at a pivotal point with transformative impacts on science and technology. From accelerating computationally demanding simulations to discerning signals from noisy data, AI/ML has become an integral part of the scientific workflows. Despite many advances, challenges remain to ensure that AI/ML applications are reliable, explainable and trustworthy.

Robotics, a growing field that couples AI with physically actuated mechanical bodies, has seen increased interest in areas spanning science, technology and manufacturing. The need for real-time decision-making and control, along with the intricate morphology of robots, makes robotics an intriguing application of AI, advanced computing and optimization.


This NYSDS 2025 is open to the public. To be eligible to attend, all participants must register online by August 30, 2025. For questions or assistance with registering, please contact the Summit Coordinator.

Register here.

The Future Histories Studio at Stony Brook University and Guggenheim New York are collaborating to present a day-long symposium on October 24 at the Simons Center for Geometry and Physics. This conference will explore urgent questions at the intersection of artificial intelligence, machine learning, and the human, and is co-organized by Noam Segal, LG Electronics Associate Curator at Guggenheim New York. In this role, Noam plays an important part in researching these topics, promoting a deeper understanding of the ways in which contemporary artists use new technologies, and developing and supporting the Guggenheim's engagement with technology-based art under the LG Guggenheim Art and Technology Initiative.

The event examines the profound transformations brought by automation--how AI compels us to rethink cognition, agency, and the conditions of reason itself. As these systems become ever more embedded in daily life--largely invisible yet deeply consequential--they challenge the very foundations of subjectivity and governance. We are surrounded by logics we cannot fully access, yet which shape our realities, while new forms of alterity arise--distinct modes of reasoning that propose collective unknowns beyond established frameworks of knowledge.

This emerging terrain invites us to consider cognitive plurality, where biological and technological intelligences generate new categories, concepts, and understandings. Once unique to humans--art, authorship, judgment, invention--are now co-articulated with systems of computation and planetary-scale infrastructure. The symposium brings together artists, scholars, and technologists to probe the cultural, philosophical, and ecological implications of this entanglement.

The concept of neurodiversity has shown that neurological differences such as autism, ADHD, and dyslexia are not deficits but variations that enrich collective life. Extending this to machines can be provocative: just as neurodivergence unsettles fixed definitions of intelligence, so too AI challenges anthropocentric assumptions about cognition. Yet the analogy is limited. Neurodiversity is rooted in the lived struggles of human communities, while machines neither think nor struggle. Human cognition involves perception, learning, memory, and reasoning through embodied experience. Machine cognition, by contrast, is computational pattern recognition and statistical modeling, without consciousness or lived context, and with only narrow forms of sensing.

For this reason, the symposium advances a broader framework of cognitive diversity or technodiversity--a recognition of proliferating intelligences, human, machinic, and hybrid, as part of a shared ecology. This shift calls for new models of creativity, responsibility, and collaboration that honor the irreducibility of human thought while engaging the radical alterity of machine logics.

Location: Stony Brook Simons Center for Geometry and Physics, Della Pietra Family Auditorium

This event is co organized by the Guggenheim New York

As generative AI tools become increasingly prevalent in education, their impact on collegiate writing raises important questions about creativity, academic integrity, and effective teaching practices. This panel brings together faculty and students to share perspectives on the opportunities and challenges that AI presents in an academic setting. Through an open dialogue, participants will engage in meaningful conversations, allowing for a deeper understanding of each other's viewpoints and fostering collaboration. Students and faculty will explore diverse ways AI can be used in teaching and learning and seek solutions to utilize AI writing tools ethically. This exchange aims to build a community of trust and shared knowledge, ensuring that AI's role in education is both innovative and responsible.

Register here: https://stonybrook.zoom.us/meeting/register/tJAqdOitpjIpHtDGAsGBfEb3ah0YIzhIJolN

Abstract: Computational pathology has revolutionized cancer diagnosis and research through the analysis of digitized whole slide images (WSIs). However, the giga-pixel size of these images presents profound technical challenges, creating two intertwined bottlenecks: computational inefficiency and label inefficiency. The immense data scale makes standard end-to-end (E2E) training of deep neural networks infeasible due to prohibitive GPU memory requirements, while the reliance on expert pathologists for annotations makes obtaining high-quality labeled data a tedious and expensive process. This proposal confronts these dual challenges by developing a series of novel model architectures, training paradigms, and self-supervised learning methods designed to create a more efficient and effective framework for WSI analysis.

To improve computational efficiency, this proposal first introduces a locally supervised learning paradigm that enables E2E training on entire WSIs by partitioning a network into gradient-isolated modules, circumventing the memory bottleneck of backpropagation. Second, it presents Prompt-MIL, a parameter-efficient fine-tuning framework that reduces the number of trainable parameters, memory consumption, and training time by fine-tuning only few prompts to guide large pre-trained models. Third, this work advances the efficient architecture on WSIs by developing novel State-Space Models (SSMs). It proposes 2DMamba, the first intrinsic Mamba architecture that preserves the crucial 2D spatial structure of images, overcoming the spatial discrepancy inherent in 1D models. Fourth, to address the inefficiency of multi-directional scans in Mamba models, including 2DMamba, it presents Locally Bi-directional Mamba (LBMamba), which introduces a novel, hardware-aware local backward scan that integrates bi-directional scan into a single forward pass, significantly improving throughput performance trade-off. Lastly, it proposes an extension to the LBMamba, warp-level Bi-directional Mamba (WLBMamba) that extends the thread-level bidirectional scan to warp-level bidirectional scan that further improves the throughput performance trade-off.

To improve label efficiency, this proposal proposes a Precise Location-based Matching strategy for self-supervised dense contrastive learning. By allowing a local patch in one augmented view to match multiple overlapping patches in another, creates a more accurate correspondence, leading to superior feature representations for dense prediction tasks like segmentation and detection.

In summary, this proposal presents a holistic investigation into the efficiency bottlenecks in computational pathology. Through these combined contributions in model architecture, training paradigms, and self-supervised learning, this work establishes a more scalable, efficient, and powerful computational framework for analyzing giga-pixel pathology images.

Speaker: Jingwei Zhang

Location: Old Computer Science Room 2114

Zoom: https://stonybrook.zoom.us/j/95187903649?pwd=tV0CNxLu1QKqw7hGmcE1h0rJ2C6n1b.1
Meeting ID: 951 8790 3649 | Passcode: 488916

Visual Analytics and Machine Learning for Biomedical Imaging Diagnosis

 

Arie Kaufman

 

We present an integrated approach using visual analytics and machine learning (ML) to diagnose abnormalities in 3D radiological imaging and biological microscopes. The primary example will involve 3D virtual pancreatography (VP), a novel visualization-ML procedure and application for non-invasive diagnosis and classification of pancreatic lesions, the precursors of pancreatic cancer. Currently, non-invasive screening of patients is performed through visual inspection of 2D axis-aligned CT images, though the relevant features are often not clearly visible nor automatically detected. VP is an end-to-end visual diagnosis system that includes an ML-based automatic segmentation of the pancreatic gland and the lesions, a semi-automatic approach to extract the primary pancreatic duct, an ML-based automatic classification of lesions into four prominent types, and specialized 3D and 2D exploratory visualizations of the pancreas, lesions and surrounding anatomy. We combine volume rendering with pancreas- and lesion-centric visualizations and measurements for effective diagnosis. We designed VP through close collaboration and feedback from expert radiologists, and evaluated it on multiple real-world CT datasets with various pancreatic lesions and case studies examined by the expert radiologists. Other applications include virtual colonoscopy, COVID-19, pathology, brain neurites, etc.


Biography: Arie Kaufman is Distinguished Professor and formerChair of the Department of Computer Science at Stony Brook University, where he is also Director of the Center for Visual Computing (CVC), and Chief Scientist at the Center of Excellence in Wireless and Information Technology (CEWIT). 

He received his PhD in Computer Science at Ben-Gurion University of the Negev in 1977.   He is known for his work in visualization, graphics, virtual reality, user interfaces, multimedia, and their applications, especially in bio-medicine. He is especially well known for his work on the 3-dimensional virtual colonoscopy, a revolutionary low-risk technique for colon cancer screening, and for pioneering the use of Graphics Processing Units (GPUs) and GPU-clusters. In 2012, he presided over the development and opening of the Reality Deck, the largest virtual reality display in the world, at Stony Brook University.

Kaufman was the founding Editor in Chief of IEEE Transactions on Visualization and Computer Graphics (TVCG), co-founded the IEEE Visualization Conference and Volume Graphics series, and is currently the director of IEEE Computer Society Technical Committee on Visualization and Graphics. He is an IEEE Fellow, ACM Fellow, winner of many awards, including the IEEE Visualization Career Award, and member of the European Academy of Sciences.



Steven Skiena is inviting you to a scheduled Zoom meeting.

Topic: AI Seminar: Arie Kaufman
Time: Apr 21, 2021 10:00 AM Eastern Time (US and Canada)

Join Zoom Meeting
https://stonybrook.zoom.us/j/96017498640?pwd=SE0rdHB6ZVlCM2ZpY2RnRUxyVnR3Zz09

University Libraries Presents:
Join librarian Christine Fena for an interactive workshop that invites you to explore AI tools first hand, not just as users, but as critical investigators.
Through playful experimentation and collaborative discovery, you'll uncover inherent biases, probe algorithmic flaws, and gain a deeper understanding of AI's limitations and societal impacts.

RSVP on SBEngaged

Location: Melville Library, Central Reading Room, Lab B