Submit an abstract celebrating research, new discoveries and achievements in medicine and science!

We encourage faculty, nurse practitioners, post-doctoral fellows, fellows, residents, medical students, graduate students and undergraduate students to submit an abstract. Original research, case reports and case series are welcome.

Abstract submission deadline: FEBRUARY 7, 2025

For more details, visit here.

The overall purpose of this seminar is to bring together people with interests in Computer Vision theory and techniques and to examine current research issues. This course will be appropriate for people who already took a Computer Vision graduate course or already had research experience in Computer Vision. To enroll in this course, you must either: (1) be in the PhD program or (2) receive permission from the instructors. Each seminar will consist of multiple short talks (around 15 minutes) by multiple students. Students can register for 1 credit for CSE656. Registered students must attend and present a minimum of 2 talks. Everyone else is welcome to attend. Fill in https://forms.gle/q6UG9ygauLp2a8Po8 to subscribe to our mailing list for further announcement.

Abstract: Traditional questionnaires remain the primary method for assessing psychological outcomes and beliefs, capturing individuals' and populations' inner states. This dissertation presents an alternative computational method that overcomes key limitations in current mental health monitoring, particularly in spatiotemporal resolution, responses to major events, and automatic belief identification. By analyzing ∼1 billion Tweets from 2 million geo-located users, we created a big data pipeline for estimating depression and anxiety at the county-week level. These Language-Based Mental Health Assessments (LBMHA) demonstrated higher reliability and validity than traditional survey measures. Our approach effectively captured mental health trends and highlighted significant increases in mental illness following major events. Using the LBMHA pipeline, we conducted quasi-experiments, research designs that simulate randomized control trials, to generate explanations for mental health changes due to COVID-19 incidence/death. Utilizing these time-series analyses, we conducted discontinuity forecasting for community-specific anxiety shifts using statistical learning via ensemble and contextual models. To likewise investigate individual internal states, we created a novel task and annotated dataset for self belief language identification. Our fine-tuned language model for self-belief classification, despite its relatively small scale, outperformed GPT-4o. The self belief topics identified by our model successfully predicted depression, anxiety, and stress, offering insights into the relationship between self-conceptualization and mental health. The adoption of scalable language-based assessments with modern distributed computation presents a promising avenue for advancing community and individual mental health research.

Speaker: Siddharth Mangalik

https://stonybrook.zoom.us/j/91251321639?pwd=faggV5jZ7ByFDCFmnLXD3HiYxjQ1Eb.1&jst=2
The New York Academy of Sciences Presents AI for Materials: From Discovery to Production - A Virtual Symposium

Event Description: This interdisciplinary symposium covers the application of artificial intelligence (AI) throughout the entire life cycle of new materials -- from materials simulations and synthesis to translating research into high-volume industrial production.

Event Link & Registration: nyas.org/AI4Materials2020
Towards Saving Lives with Natural Language Processing Andrew Schwartz Dept. of Computer Science Stony Brook Analyzing language use patterns is proving to be a valuable and unique approach to understanding the psychological, social, and health factors of people. On the individual level, Facebook and Twitter have been found predictive of mental health, personality, demographics, and occupational class (among others). At the community or county-level, Twitter has been found predictive of flu and allergy outbreaks, life satisfaction, atherosclerotic heart disease mortality, health behavioral risk factors, excessive drinking, and HIV prevalence. While these techniques have shown robust links over a plethora of important aspects of human life, it is not clear whether any lives have been saved, at least directly, by such work. At their core, some barriers to improving health care and saving lives are likely not NLP or even AI problems, but others are perhaps technical in nature and suggest changing the way we model data. This seminar will have two parts: a presentation and a discussion. I will start by going over recent and on-going work toward predicting mental health outcomes --- depression, addiction relapse, future psychological distress --- from human language use patterns. Then, I will present an imperfect vision of a future where NLP helps to save lives and open the floor for discussion of technical barriers and whether such a vision is practical. Biography: Andrew Schwartz received his PhD in Computer Science from the University of Central Florida in 2011 with research on acquiring lexical semantic knowledge from the Web. He then joined the University of Pennsylvania where he was a Postdoctoral Research Fellow and later Visiting Assistant Professor in Computer & Information Science. He is Lead Research Scientist for the World Well-Being Project, a multidisciplinary group of Computer Scientists and Psychologists studying physical and psychological well-being based on language in social media.
Abstract: Artificial intelligence (AI) is rapidly transforming scientific discovery, enabling breakthroughs in areas ranging from drug discovery to modeling complex physical systems. In the life sciences, AI has traditionally been applied to prediction tasks such as classifying molecules as toxic or non-toxic, estimating drug properties, or solving partial differential equations. These discriminative models have proven powerful, but they are inherently limited to mapping existing inputs to deterministic outputs. A new wave of methods is shifting the paradigm from discrimination to generation: creating new possibilities, such as generating novel molecules or designing new drugs. By reframing AI as both a predictive and generative engine, this shift offers new pathways for accelerating discovery and innovation in life sciences at an unprecedented scale. This talk will cover several aspects of AI for Science (AI4Sci), beginning with advances in discriminative models for molecular systems and solving PDEs, and then turning to generative approaches, including diffusion models for 3D molecular generation and large language models for drug editing. Together, these developments illustrate how moving from prediction to creation is redefining what AI can contribute to science.

Bio: Wenhan Gao is a fourth-year Ph.D. student in Applied Mathematics under the supervision of Professor Yi Liu. He was also a Staff Research Scientist Intern at VISA Research, where he worked on large language models (LLMs) and multi-agent systems for commerce. Wenhan's research focuses on AI for Science (AI4Sci), with a particular emphasis on generative AI. His work looks deep into the fundamental mechanisms of AI models when applied to scientific tasks, and he strives to incorporate established scientific priors, such as symmetry, into model design. He has published papers as a first or corresponding author in leading AI and computational venues, including ICLR, ICML, NeurIPS, TMLR, ACL, and the Journal of Computational Physics. In addition to his research, Wenhan has served as a reviewer and oral session chair for top AI conferences and as a lecturer for both undergraduate and graduate courses at Stony Brook University.

Location: IACS Seminar Room or Zoom

This seminar will take place in person and online*

Join Zoom Meeting: https://stonybrook.zoom.us/j/91670093552?pwd=2EcniXqPZLTpa4ZBKRs1zAjYqs1LS0.1

Meeting ID: 916 7009 3552
Passcode: 434045
Join us as we celebrate this year's Brook & Beyond Challenge finalists.
The Office for Research and Innovation invites you to hear about the two-month journey in which the Brook & Beyond team supported eight cohorts in bringing their bold ideas from the lab to the marketplace. It's an energizing evening that highlights the collaboration, creativity, and entrepreneurial spirit driving discovery across the University.
Meet this year's award recipients, hear pitches from the emerging founders, and applaud their achievements.
Connect, celebrate, and be part of the momentum shaping the future of innovation at
Stony Brook University.
Refreshments will be served. Registration is required.
Register Here.
Abstract: Many foundation models for digital pathology have been released recently. Benchmarking available methods then becomes paramount to get a clearer view of the research landscape. For this reason, we introduce THUNDER, a tile-level benchmark for digital pathology foundation models, allowing for efficient comparison of many models on diverse datasets with a series of downstream tasks, studying their feature spaces and assessing the robustness and uncertainty of predictions informed by their embeddings. Such foundation models are often used as feature extractors and combined with Multiple Instance Learning (MIL) aggregators at downstream time. Such aggregation must be efficient and reliable. We will focus on two specific examples of this: (I) HistAug, a fast and efficient generative model for controllable augmentations in the latent space of foundation models to perform data augmentation for MIL, and (ii) CAR-MIL, a method based on counterfactual attention regularisation to improve the reliability of attention maps of MIL methods.

Short-bio: Pierre Marza is a Postdoctoral Researcher at CentraleSupelec in the Biomathematics team of the MICS lab, studying Computer Vision and Deep Learning for Medical Imaging, with a focus on Digital Pathology. Prior to this, he was a PhD student at INSA Lyon, in the LIRIS and CITI labs, advised by Christian Wolf, and co-advised by Laetita Matignon and Olivier Simonin. He studied Visual Navigation, Embodied AI, Spatial Reasoning, more specifically how to learn to represent 3D space, generalize to new environments and master diverse tasks from light supervision.

Location: NCS 220

Zoom: https://stonybrook.zoom.us/j/94798224254?pwd=CFraer25qnpORbJ14aAVHRwaSJOjJM.1